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GENE GUIDE

STXBP1-Related Syndrome

This guide is not meant to take the place of medical advice. Please consult with your doctor about your genetic results and health care choices. This Gene Guide was last updated in 2026. As new information comes to light with new research we will update this page. You may find it helpful to share this guide with friends and family members or doctors and teachers of the person who has STXBP1-Related Syndrome.
a doctor sees a patient

STXBP1-related syndrome is also called STXBP1 encephalopathy or developmental and epileptic encephalopathy 4. For this webpage, we will be using the name STXBP1-related syndrome to encompass the wide range of variants observed in the people identified.

STXBP1-related syndrome happens when there are changes to the STXBP1 gene. These changes can keep the gene from working as it should.

Key Role

The STXBP1 gene plays a key role in how brain cells communicate.

Symptoms

Because the STXBP1 gene is important for brain activity, many people who have STXBP1-related syndrome have:

  • Developmental delay
  • Intellectual disability
  • Developmental regression
  • Seizures
  • Movement challenges
  • Language delay
  • Language impairment
  • Low muscle tone
  • Brain changes seen on magnetic resonance imaging (MRI)
  • Autism spectrum disorder or features of autism
  • Hyperactivity
  • Self-aggressive behaviors

STXBP1-related syndrome is a genetic condition, which means that it is caused by variants in genes. Our genes contain the instructions, or code, that tell our cells how to grow, develop, and work. Every child gets two copies of the STXBP1 gene: one copy from their mother’s egg, and one copy from their father’s sperm. In most cases, parents pass on exact copies of the gene to their child. But the process of creating the egg or sperm is not perfect. A change in the genetic code can lead to physical issues, developmental issues, or both. 

Sometimes a spontaneous variant happens in the sperm, egg or after fertilization. When a brand new genetic variant happens in the genetic code is called a ‘de novo’ genetic variant. The child is usually the first in the family to have the genetic variant.

De novo variants can take place in any gene. We all have some de novo variants, most of which don’t affect our health. But because STXBP1 plays a key role in development, de novo variants in this gene can have a meaningful effect. 

Research shows that STXBP1-related syndrome is often the result of a de novo variant in STXBP1. Many parents who have had their genes tested do not have the STXBP1 genetic variant found in their child who has the syndrome. In some cases, STXBP1-related syndrome happens because the genetic variant was passed down from a parent.

Autosomal dominant conditions

STXBP1-related syndrome is an autosomal dominant genetic condition. This means that when a person has the one damaging variant in STXBP1 they will likely have symptoms of STXBP1-related syndrome. For someone with an autosomal dominant genetic syndrome, every time they have a child there is a 50 percent chance they pass on the same genetic variant and a 50 percent chance they do not pass on the same genetic variant.

Autosomal Dominant Genetic Syndrome

GENE / gene
GENE / gene
Genetic variant that happens in sperm or egg, or after fertilization
GENE / gene
Child with de novo genetic variant
gene / gene
Non-carrier child
gene / gene
Non-carrier child

No parent causes their child’s STXBP1-related syndrome. We know this because no parent has any control over the gene changes that they do or do not pass on to their children. Please keep in mind that nothing a parent does before or during the pregnancy causes this to happen. The gene change takes place on its own and cannot be predicted or stopped.

Each family is different. A geneticist or genetic counselor can give you advice on the chance that this will happen again in your family.

The risk of having another child who has STXBP1-related syndrome depends on the genes of both biological parents. 

  • If neither biological parent has the same genetic variant found in their child, the chance of having another child who has the syndrome is on average 1 percent. This 1 percent chance is higher than the chance of the general population. The increase in risk is due to the very unlikely chance that more of the mother’s egg cells or the father’s sperm cells carry the same genetic variant. 
  • If one biological parent has the same genetic variant found in their child, the chance of having another child who has the syndrome is 50 percent

For a symptom-free brother or sister of someone who has STXBP1-related syndrome, the sibling’s risk of having a child who has STXBP1-related syndrome depends on the sibling’s genes and their parents’ genes. 

  • If neither parent has the same genetic variant causing STXBP1-related syndrome, the symptom-free sibling has a nearly 0 percent chance of having a child who would inherit STXBP1-related syndrome. 
  • If one biological parent has the same genetic variant causing STXBP1-related syndrome, the symptom-free sibling has a 50 percent chance of also having the same genetic variant. If the symptom-free sibling has the same genetic variant, their chance of having a child who has the genetic variant is 50 percent. 

For a person who has STXBP1-related syndrome, the risk of having a child who has the syndrome is about 50 percent.

As of 2026, over 600 people in the world with changes in the STXBP1 gene have been described in medical research. The first case of STXBP1-related syndrome was described in 2008. Scientists expect to find more people who have the syndrome as access to genetic testing improves.

People who have STXBP1-related syndrome might not look very different.

Scientists and doctors have only just begun to study STXBP1-related syndrome. At this point, there are no medicines designed to treat the syndrome. A genetic diagnosis can help people decide on the best way to track the condition and manage therapies. Doctors can refer people to specialists for:

    • Physical exams and brain studies
    • Genetics consults
    • Development and behavior studies
    • Other issues, as needed

A developmental pediatrician, neurologist, or psychologist can follow progress over time and can help:

    • Suggest the right therapies. This can include physical, occupational, speech, or behavioral therapy.
    • Guide individualized education plans (IEPs).

Specialists advise that therapies for STXBP1-related syndrome should begin as early as possible, ideally before a child begins school.

If seizures happen, consult a neurologist. There are many types of seizures, and not all types are easy to spot. To learn more, you can refer to resources such as the Epilepsy Foundation’s website: www.epilepsy.com/learn/types

This section includes a summary of information from major published articles. It highlights how many people have different symptoms. To learn more about the articles, see the Sources and references section of this guide.

Learning and Speech

People with STXBP1-related syndrome had developmental delay or intellectual disability, and speech delay or impairment. About 1 in 10 children had a developmental regression.

  • 487 out of 534 people had developmental delay or intellectual disability (91 percent)
  • 258 out of 534 people had speech delay or impairment (48 percent)
  • 56 out of 534 people had a developmental regression (11 percent)
91%
487 out of 534 people had developmental delay or intellectual disability.
48%
258 out of 534 people had speech delay or impairment.
11%
56 out of 534 people had a developmental regression.

Behavior

Some people with STXBP1-related syndrome had behavioral issues, such as autism or features of autism, hyperactivity or attention-deficit/hyperactivity disorder (ADHD), and self-injury behavior.

  • 86 out of 534 people had autism or features of autism (16 percent)
  • 22 out of 534 people had hyperactivity or ADHD (4 percent)
  • 13 out of 534 people had self-injury behavior (2 percent)

Brain

People with STXBP1-related syndrome had seizures, low muscle tone (hypotonia), brain changes seen on magnetic resonance imaging (MRI), or movement issues, such as ataxia, tremor, dystonia, hypomimia, bradykinesia, dyskinesia, or choreoathetosis.

About 1 in 5 people were unable to walk. Some people had seizures even though they were on pain medications (refractory seizures).

Some researchers have suggested that adults with STXBP1-related syndrome have a much higher rate of refractory seizures and movement disorders than children with the condition.

  • 474 out of 534 people had seizures (89 percent)
  • 73 out of 534 people had refractory seizures (14 percent)
  • 216 out of 534 people had hypotonia (40 percent)
  • 128 out of 534 people had ataxia (24 percent)
  • 82 out of 534 people had tremor (15 percent)
  • 28 out of 534 people had dystonia (5 percent)
  • 108 out of 534 people were unable to walk (20 percent)
Human head showing brain outline

Graphs

 
 
 
 
 
 
 

100%

80%

60%

40%

20%

0

Seizures
Refractory seizures
Hypotonia
Ataxia
Tremor
Dystonia
Unable to walk

The most common seizure types were focal-onset seizures, generalized-onset seizures, and infantile spasms. Seizure onset typically occurred within the first year of life. Several people experienced more than one seizure type. Other common seizure types included:

  • Infantile spasms
  • Generalized tonic
  • Generalized tonic-clonic
  • Focal impaired awareness
  • Generalized myoclonic
  • Focal clonic
  • Focal tonic
  • Focal motor

Vision

Some people with STXBP1-related syndrome had vision issues, including uncontrolled eye movements (nystagmus), crossed eyes (strabismus), and cerebral visual impairment.

  • 51 out of 534 people had vision issues (10 percent)

Gastrointestinal

People with STXBP1-related syndrome had gastrointestinal issues, such as gastroesophageal reflux disease (GERD), gastrostomy tube feeding in infancy, feeding difficulties, and constipation.

  • 25 out of 534 people had GERD (5 percent)
  • 14 out of 534 people had gastrostomy tube feeding in infancy (3 percent)
  • 16 out of 534 people had feeding difficulties (3 percent)

Where can I find support and resources?

STXBP1 Foundation

STXBP1 Foundation is dedicated to finding a cure for STXBP1-Related Disorders (STXBP1-RD) while improving the lives of our patients and families. Founded in 2017, STXBP1 Foundation is a parent-led advocacy organization. STXBP1-RD is a rare neurodevelopmental disorder caused by changes in the STXBP1 gene. With an incidence of approximately 1 in 30,000 live births, STXBP1-RD is one of the most common genetic causes of epilepsy.

Simons Searchlight

Simons Searchlight is an online international research program, building an ever growing natural history database, biorepository, and resource network of over 175 rare genetic neurodevelopmental disorders. By joining their community and sharing your experiences, you contribute to a growing database used by scientists worldwide to advance the understanding of your genetic condition. Through online surveys and optional blood sample collection, they gather valuable information to improve lives and drive scientific progress. Families like yours are the key to making meaningful progress. To register for Simons Searchlight, go to the Simons Searchlight website at www.simonssearchlight.org and click “Join Us.”

Other resources:

Sources and references

The content in this guide comes from published studies about STXBP1-related syndrome. Below you can find details about each study, as well as links to summaries or, in some cases, the full article.

  • Xian, J., Parthasarathy, S., Ruggiero, S. M., Balagura, G., Fitch, E., Helbig, K., Gan, J., Ganesan, S., Kaufman, M. C., … & Helbig, I. (2022). Assessing the landscape of STXBP1-related disorders in 534 individuals. Brain, 145(5), 1668-1683. doi:10.1093/brain/awab327
  • Mercimek-Andrews, S. STXBP1 encephalopathy with epilepsy. 2023 Sep 28. In: Adam MP, Bick S, Mirzaa GM, et al., editors. GeneReviews® [Internet]. Seattle (WA): University of Washington, Seattle; 1993-2026. Available from: https://www.ncbi.nlm.nih.gov/books/NBK396561/

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